Student Interests:
Large throughput sequencing evaluation; bioinformatic analysis and system biology of germs; comparative genomics; diagnosis and annotation of non-coding RNAs; co-evolution of proteins and RNAs; algorithmic bioinformatics.
Thesis subject
Unusual diseases, particularly Mendelian and monogenic, have played a important role in elucidating the genetic basis of human diseases.
NGS
The evolution of modern techniques like next generation sequencing (NGS) together with the growth of computing power and bioinformatic software growth has empowered broader-scale analysis of rare diseases to understand their biological mechanics, genomic and proteomic basis, surroundings, and the mix of the different contributing factors.
Therefore, particularly in the light of incomplete clinical penetrance, some uncommon diseases are viewed as complicated ailments. Massive quantities of biological information at different levels have been accumulated during the previous ten years, such as NGS (entire genome/exome sequencing, RNA-seq, DNA methylation), proteomics, and metabolomics, Cell Culture ( JoMa1).
These complex and massive data pose challenges for bioinformatic analyses, particularly in the interpretation and comprehension of biological mechanisms underlying ailments. We welcome submissions of reviews, research articles, brief communications, and theory papers.
Source
Journal of Online Mathematics and Biology Education
Mdpi.com/si/19452 Particular Issue
Prof. Dr. J. Peter W. Young Department of Biology, University of York, Heslington, York YO10 5DD, UK
Synopsis:
Genes are fundamental to our comprehension of biology, and modern improvements like genomics and genome editing have claimed genetics as a lively, varied and fast moving discipline. There’s a demand for great quality, open access journals in this region, and also the G e n e s group intends to present expert manuscript managing, serious peer evaluation, and quick publication across the entire field of genetics. Why not believe Gen mathematics for the next Epigenetic signal transduction theory?
Downloadable ESTEEM Modules
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Botany | 3D FractaL-Tree | John R. Jungck Jennifer A Spangenberg Noppadon Khiripet Rawin Viruchpinta Jutarat Maneewattanapluk | |
Genetics | ABO Blood Group Frequencies | John R. Jungck Jennifer A Spangenberg | win98, win2000, winXP |
Biochemistry | Balancing Chemical Equations Using Matrix Algebra | John R. Jungck Jennifer A Spangenberg | win98, win2000, winXP, os9 |
Biometrics | BioBayes | John R. Jungck Jennifer Galovich Joe Reistetter | win98, win2000, winXP, os9, osx, linux |
Ecology | Biodiversity | Kokou Abalo Sybille Clayton Francie Cuffney Phil Ryan Paul Schuette | mac9, osx, win2000, win98 |
Bioinformatics | BioGrapher | Rama Viswanathan Han Lai Hlaing Lin Khalid Qumsieh John R. Jungck | New version coming soon (03/2014), osx, win2000, win98 |
Developmental Biology Bioinformatics | Biological Cellular Automata Laboratory (BioCA Lab) | John R. Jungck Jennifer A Spangenberg | win98, win2000, winXP |
Biometrics Bioinformatics | Biostatistical Tools | Tony Weisstein Rama Viswanathan Sheldon Gordon Jennifer A Spangenberg | all, win2000, winXP |
Genetics Bioinformatics | Birthday Problem and Class Phenotypic Probabilities | John R. Jungck Annelise L Myers Jennifer A Spangenberg | all, win2000, winXP |
Biochemistry Bioinformatics | Buffer Preparation | John R. Jungck Annelise L Myers Stephanie Gage | all, win2000, winXP |
Ecology Bioinformatics | Continuous Growth Models | Tony Weisstein | all, win2000, winXP |
Biometrics Bioinformatics | Database Construction and Sampling | D. Timothy Gerber David M. Reineke | , win2000, winXP |
Evolution Bioinformatics | DeFinetti 1.0 | Tony Weisstein John R. Jungck Tia Johnson Ed Louis | all, win2000, winXP |
Bioinformatics Genetics | Deme 2.0 | Tony Weisstein | , win2000, winXP |
Developmental Biology Genetics | Developmental Allometry: Scaling in Growth | John R. Jungck Jennifer A Spangenberg | win98, win2000, winXP, win2000, winXP |
Evolution Sequence Alignment | Dynamic Programming | Tony Weisstein | , mac9, osx, win2000, win98, winxp |
Evolution Sequence Alignment | ESS: Evolutionary Stable Strategies Game Theory Module | John R. Jungck Jennifer A Spangenberg | win98, win2000, winXP, os9, osx, linux |
Phylogenetics Sequence Alignment | EvolSeq | Tony Weisstein John R. Jungck | all, win2000, winXP, os9, osx, linux |
Bioinformatics Genetics | Evolution Through Natural Selection | Tim Comar | , win2000, winXP, os9, osx, linux |
Biometrics Genetics | Fractal Fern Generator | Berend Meijer | , win2000, winXP, os9, osx, linux |
Genetics Genetics | Genetic Code | Tony Weisstein | all, win2000, winXP, os9, osx, linux |
Phylogenetics Genetics | GeoPhyl | Tony Weisstein | all, win2000, winXP, os9, osx, linux |
Bioinformatics Evolution Mathematics Phylogenetics | Hidden Markov Model | Tony Weisstein | mac9, osx, win2000, win98, winxp |
Ecology Evolution Mathematics Phylogenetics | Island Biogeography | John R. Jungck Jennifer A Spangenberg | win98, win2000, winXP, osx, win2000, win98, winxp |
Genetics Evolution Mathematics Phylogenetics | javaBenzer | John R. Jungck Vince Streif Peder Jungck Stephen Everse | all, osx, win2000, win98, winxp |
Ecology Evolution Mathematics Phylogenetics | javaFOODWEB | John R. Jungck Vince Streif | win98, win2000, winXP, os9, osx, linux |
Ecology Evolution Mathematics Phylogenetics | Leslie/Lefkovitch Matrix Models for Age or Stage-structured Populations | John R. Jungck Jennifer A Spangenberg | win98, win2000, winXP, win2000, winXP, os9, osx, linux |
Genetics Evolution Mathematics Phylogenetics | Linkage Analysis | Tony Weisstein | all, win2000, winXP, os9, osx, linux |
Evolution Evolution Mathematics Phylogenetics | Luria-Delbruck | Tony Weisstein John R. Jungck Doug Green | all, win2000, winXP, os9, osx, linux |
Ecology Tools | Mark-Recapture | Jessie Panks John R. Jungck | , win2000, winXP, os9, osx, linux |
Biochemistry Ecology Tools | Michaelis-Menten Enzyme Kinetics | Tony Weisstein | , win2000, winXP, os9, osx, linux |
Genetics Ecology Tools | Operon | Tony Weisstein | all, win2000, winXP, os9, osx, linux |
Biomathematics Mathematics Physiology | Pharmacokinetics | Gretchen A. Koch | Slow processing in Excel 2008 for Mac, mac9, osx, win2000, win98, winxp |
Phylogenetics Mathematics Physiology | Phylogeography Simulator | Tony Weisstein | all, mac9, osx, win2000, win98, winxp |
Biometrics Mathematics Physiology | PopTools | Greg Hood | win98, win2000, winXP |
Bioinformatics Mathematics Physiology | Protein Analysis | John R. Jungck Annelise L Myers Srebrenka Robic Gerry Shaw | all, win2000, winXP |
Bioinformatics Mathematics Physiology | Serial Dilutions | Marion Field Fass Annelise L Myers | , win2000, winXP |
Epidemiology Mathematics Physiology | SIR Model | Tony Weisstein | all, win2000, winXP |
Phylogenetics Mathematics Physiology | Split Decomp | Tony Weisstein John R. Jungck | all, win2000, winXP |
Ecology Mathematics Physiology | Two-Species Model | Tony Weisstein Rene Salinas John R. Jungck | mac9, osx, win2000, win98, winxp |
Mathematics Physiology | WDISPLAY: Wireless Room Area Network (RAN) Data Display Utility | Rama Viswanathan | winXP, osx, win2000, win98, winxp |